wdl: Workflow Description Language - Specification and Implementations
cromwell: Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
dockerflow: Dockerflow is a workflow runner that uses Dataflow to run a series of tasks in Docker with the Pipelines API
BigJob: SAGA-based Pilot-Job Implementation for Compute and Data
cwl-intro-gui-workshop: Materials to teach workshop about CWL using the Rabix Composer
common-workflow-language: Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊
csg_mri_pipelines: MRI preprocessing and analysis pipelines and tools for the study of disorders of consciousness
nextflow: A DSL for data-driven computational pipelines
pyxnat: XNAT in Python
galaxy: Data intensive science for everyone.
pipeline-scheduler: Flask server to schedule and process XNAT pipelines with OpenStack
sciluigi: A light-weight wrapper library around Spotify's Luigi workflow library to make writing scientific workflows more fluent, flexible and modular
hcp2nipype-hack2015: The outcomes of the HCP to Nipype project at the OHBM Hackathon 2015.
binder: reproducible executable environments
earlPipeline: A backend-agnostic web application for visualizing and constructing modular data-processing pipelines
airflow: Apache Airflow - A platform to programmatically author, schedule, and monitor workflows
nipype: Workflows and interfaces for neuroimaging packages
fractalide: Reusable Reproducible Composable Software
papy: The papy package provides an implementation of the flow-based programming paradigm in Python
awesome-pipeline: A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin
ruffus: CGAT-ruffus is a lightweight python module for running computational pipelines
timely-dataflow: A modular implementation of timely dataflow in Rust
cwl_generator: A simple angular form for generating CWL tools and workflows
digdag: Workload Automation System
pipe_tasks: LSST Data Management: astronomical data processing tasks
cuneiform: Cuneiform distributed programming language
mara-pipelines: A lightweight opinionated ETL framework, halfway between plain scripts and Apache Airflow
argparse2tool: transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
scipipe: Robust, flexible and resource-efficient pipelines using Go and the commandline
cbrain: CBRAIN is a flexible Ruby on Rails framework for accessing and processing of large data on high-performance computing infrastructures.
r-xnat: XNAT library for R
linter-cwl: linter for cwl
argo: Argo Workflows: Get stuff done with Kubernetes.
ahoy: Create self-documenting cli programs from YAML files. Easily wrap bash, grunt, npm, docker, (anything) to standardize your processes and make the lives of the people working on your project better.
awesome-fbp: Awesome Flow-Based Programming (FBP) Resources
nifi-minifi: Apache MiNiFi (a subproject of Apache NiFi)
cwl-airflow: Python package to extend Airflow functionality with CWL1.1 support
nifi-fds: Mirror of Apache NiFi Flow Design System
arborCollections: managing collections of functions and workflows in arbor
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