- ibllib: IBL core shared libraries
- BrainImagingPipelines: BIPs
- SPM_connectome: Analysis of the data from the human connectome with SPM
- C-PAC: Configurable Pipeline for the Analysis of Connectomes
- HCPpipelines: Processing pipelines for the HCP
- pipedream: PipeDream - open source neuroimaging pipelines
- hcp2nipype-hack2015: The outcomes of the HCP to Nipype project at the OHBM Hackathon 2015.