- Z-Brain: Z-Brain Viewer and Analysis Scripts for MAP-Mapping
- brainbrowser: Web-based visualization tools for neurological data.
- fishexplorer: https://zebrafishatlas.zib.de/
- Papaya: A pure JavaScript medical research image viewer.
- Scalable-Brain-Atlas: Source code of the Scalable Brain Atlas website (scalablebrainatlas.incf.org)